diff --git a/include/appendix1.md b/include/appendix1.md new file mode 100644 index 0000000..ebec7e5 --- /dev/null +++ b/include/appendix1.md @@ -0,0 +1,11 @@ +# Appendix information + +Appendices can be broken into separate sections just like in the main text. +The only difference is that each appendix section is indexed by a letter +(A, B, C, etc.) instead of a number. Likewise numbered equations have +the section letter appended. Here is an equation as an example. +\begin{equation} +I = \frac{1}{1 + d_{1}^{P (1 + d_{2} )}} +\end{equation} +Appendix tables and figures should not be numbered like equations. Instead +they should continue the sequence from the main article body. diff --git a/include/appendix2.md b/include/appendix2.md new file mode 100644 index 0000000..59ccf41 --- /dev/null +++ b/include/appendix2.md @@ -0,0 +1,15 @@ +# Author publication charges + +Finally some information about the AAS Journal's publication charges. +In April 2011 the traditional way of calculating author charges based on +the number of printed pages was changed. The reason for the change +was due to a recognition of the growing number of article items that could not +be represented in print. Now author charges are determined by a number of +digital ``quanta``. A single quantum is 350 words, one figure, one table, +and one enhanced digital item. For the latter this includes machine readable +tables, figure sets, animations, and interactive figures. The current cost +for the different quanta types is available at +\url{https://journals.aas.org/article-charges-and-copyright/#author_publication_charges}. +Authors may use the ApJL length calculator to get a *rough* estimate of +the number of word and float quanta in their manuscript. The calculator +is located at \url{https://authortools.aas.org/ApJL/betacountwords.html}. diff --git a/include/appendix3.md b/include/appendix3.md new file mode 100644 index 0000000..ce40a49 --- /dev/null +++ b/include/appendix3.md @@ -0,0 +1,104 @@ +# Rotating tables + +The process of rotating tables into landscape mode is slightly different in +\aastex v6.31. Instead of the `\rotate` command, a new environment +has been created to handle this task. To place a single page table in a +landscape mode start the table portion with +`\begin{rotatetable}` and end with +`\end{rotatetable}`. + +Tables that exceed a print page take a slightly different environment since +both rotation and long table printing are required. In these cases start +with `\begin{longrotatetable}` and end with +`\end{longrotatetable}`. Table \ref{chartable} is an +example of a multi-page, rotated table. The `\movetabledown` +command can be used to help center extremely wide, landscape tables. The +command `\movetabledown=1in` will move any rotated table down 1 +inch. + +\begin{longrotatetable} +\begin{deluxetable*}{lllrrrrrrll} +\tablecaption{Observable Characteristics of +Galactic/Magellanic Cloud novae with X-ray observations\label{chartable}} +\tablewidth{700pt} +\tabletypesize{\scriptsize} +\tablehead{ +\colhead{Name} & \colhead{V$_{max}$} & +\colhead{Date} & \colhead{t$_2$} & +\colhead{FWHM} & \colhead{E(B-V)} & +\colhead{N$_H$} & \colhead{Period} & +\colhead{D} & \colhead{Dust?} & \colhead{RN?} \\ +\colhead{} & \colhead{(mag)} & \colhead{(JD)} & \colhead{(d)} & +\colhead{(km s$^{-1}$)} & \colhead{(mag)} & \colhead{(cm$^{-2}$)} & +\colhead{(d)} & \colhead{(kpc)} & \colhead{} & \colhead{} +} +\startdata +CI Aql & 8.83 (1) & 2451665.5 (1) & 32 (2) & 2300 (3) & 0.8$\pm0.2$ (4) & 1.2e+22 & 0.62 (4) & 6.25$\pm5$ (4) & N & Y \\ +{\bf CSS081007} & \nodata & 2454596.5 & \nodata & \nodata & 0.146 & 1.1e+21 & 1.77 (5) & 4.45$\pm1.95$ (6) & \nodata & \nodata \\ +GQ Mus & 7.2 (7) & 2445352.5 (7) & 18 (7) & 1000 (8) & 0.45 (9) & 3.8e+21 & 0.059375 (10) & 4.8$\pm1$ (9) & N (7) & \nodata \\ +IM Nor & 7.84 (11) & 2452289 (2) & 50 (2) & 1150 (12) & 0.8$\pm0.2$ (4) & 8e+21 & 0.102 (13) & 4.25$\pm3.4$ (4) & N & Y \\ +{\bf KT Eri} & 5.42 (14) & 2455150.17 (14) & 6.6 (14) & 3000 (15) & 0.08 (15) & 5.5e+20 & \nodata & 6.5 (15) & N & M \\ +{\bf LMC 1995} & 10.7 (16) & 2449778.5 (16) & 15$\pm2$ (17) & \nodata & 0.15 (203) & 7.8e+20 & \nodata & 50 & \nodata & \nodata \\ +LMC 2000 & 11.45 (18) & 2451737.5 (18) & 9$\pm2$ (19) & 1700 (20) & 0.15 (203) & 7.8e+20 & \nodata & 50 & \nodata & \nodata \\ +{\bf LMC 2005} & 11.5 (21) & 2453700.5 (21) & 63 (22) & 900 (23) & 0.15 (203) & 1e+21 & \nodata & 50 & M (24) & \nodata \\ +{\bf LMC 2009a} & 10.6 (25) & 2454867.5 (25) & 4$\pm1$ & 3900 (25) & 0.15 (203) & 5.7e+20 & 1.19 (26) & 50 & N & Y \\ +{\bf SMC 2005} & 10.4 (27) & 2453588.5 (27) & \nodata & 3200 (28) & \nodata & 5e+20 & \nodata & 61 & \nodata & \nodata \\ +{\bf QY Mus} & 8.1 (29) & 2454739.90 (29) & 60: & \nodata & 0.71 (30) & 4.2e+21 & \nodata & \nodata & M & \nodata \\ +{\bf RS Oph} & 4.5 (31) & 2453779.44 (14) & 7.9 (14) & 3930 (31) & 0.73 (32) & 2.25e+21 & 456 (33) & 1.6$\pm0.3$ (33) & N (34) & Y \\ +{\bf U Sco} & 8.05 (35) & 2455224.94 (35) & 1.2 (36) & 7600 (37) & 0.2$\pm0.1$ (4) & 1.2e+21 & 1.23056 (36) & 12$\pm2$ (4) & N & Y \\ +{\bf V1047 Cen} & 8.5 (38) & 2453614.5 (39) & 6 (40) & 840 (38) & \nodata & 1.4e+22 & \nodata & \nodata & \nodata & \nodata \\ +{\bf V1065 Cen} & 8.2 (41) & 2454123.5 (41) & 11 (42) & 2700 (43) & 0.5$\pm0.1$ (42) & 3.75e+21 & \nodata & 9.05$\pm2.8$ (42) & Y (42) & \nodata \\ +V1187 Sco & 7.4 (44) & 2453220.5 (44) & 7: (45) & 3000 (44) & 1.56 (44) & 8.0e+21 & \nodata & 4.9$\pm0.5$ (44) & N & \nodata \\ +{\bf V1188 Sco} & 8.7 (46) & 2453577.5 (46) & 7 (40) & 1730 (47) & \nodata & 5.0e+21 & \nodata & 7.5 (39) & \nodata & \nodata \\ +{\bf V1213 Cen} & 8.53 (48) & 2454959.5 (48) & 11$\pm2$ (49) & 2300 (50) & 2.07 (30) & 1.0e+22 & \nodata & \nodata & \nodata & \nodata \\ +{\bf V1280 Sco} & 3.79 (51) & 2454147.65 (14) & 21 (52) & 640 (53) & 0.36 (54) & 1.6e+21 & \nodata & 1.6$\pm0.4$ (54) & Y (54) & \nodata \\ +{\bf V1281 Sco} & 8.8 (55) & 2454152.21 (55) & 15:& 1800 (56) & 0.7 (57) & 3.2e+21 & \nodata & \nodata & N & \nodata \\ +{\bf V1309 Sco} & 7.1 (58) & 2454714.5 (58) & 23$\pm2$ (59) & 670 (60) & 1.2 (30) & 4.0e+21 & \nodata & \nodata & \nodata & \nodata \\ +{\bf V1494 Aql} & 3.8 (61) & 2451515.5 (61) & 6.6$\pm0.5$ (61) & 1200 (62) & 0.6 (63) & 3.6e+21 & 0.13467 (64) & 1.6$\pm0.1$ (63) & N & \nodata \\ +{\bf V1663 Aql} & 10.5 (65) & 2453531.5 (65) & 17 (66) & 1900 (67) & 2: (68) & 1.6e+22 & \nodata & 8.9$\pm3.6$ (69) & N & \nodata \\ +V1974 Cyg & 4.3 (70) & 2448654.5 (70) & 17 (71) & 2000 (19) & 0.36$\pm0.04$ (71) & 2.7e+21 & 0.081263 (70) & 1.8$\pm0.1$ (72) & N & \nodata \\ +{\bf V2361 Cyg} & 9.3 (73) & 2453412.5 (73) & 6 (40) & 3200 (74) & 1.2: (75) & 7.0e+21 & \nodata & \nodata & Y (40) & \nodata \\ +{\bf V2362 Cyg} & 7.8 (76) & 2453831.5 (76) & 9 (77) & 1850 (78) & 0.575$\pm0.015$ (79) & 4.4e+21 & 0.06577 (80) & 7.75$\pm3$ (77) & Y (81) & \nodata \\ +{\bf V2467 Cyg} & 6.7 (82) & 2454176.27 (82) & 7 (83) & 950 (82) & 1.5 (84) & 1.4e+22 & 0.159 (85) & 3.1$\pm0.5$ (86) & M (87) & \nodata \\ +{\bf V2468 Cyg} & 7.4 (88) & 2454534.2 (88) & 10: & 1000 (88) & 0.77 (89) & 1.0e+22 & 0.242 (90) & \nodata & N & \nodata \\ +{\bf V2491 Cyg} & 7.54 (91) & 2454567.86 (91) & 4.6 (92) & 4860 (93) & 0.43 (94) & 4.7e+21 & 0.09580: (95) & 10.5 (96) & N & M \\ +V2487 Oph & 9.5 (97) & 2450979.5 (97) & 6.3 (98) & 10000 (98) & 0.38$\pm0.08$ (98) & 2.0e+21 & \nodata & 27.5$\pm3$ (99) & N (100) & Y (101) \\ +{\bf V2540 Oph} & 8.5 (102) & 2452295.5 (102) & \nodata & \nodata & \nodata & 2.3e+21 & 0.284781 (103) & 5.2$\pm0.8$ (103) & N & \nodata \\ +V2575 Oph & 11.1 (104) & 2453778.8 (104) & 20: & 560 (104) & 1.4 (105) & 3.3e+21 & \nodata & \nodata & N (105) & \nodata \\ +{\bf V2576 Oph} & 9.2 (106) & 2453832.5 (106) & 8: & 1470 (106) & 0.25 (107) & 2.6e+21 & \nodata & \nodata & N & \nodata \\ +{\bf V2615 Oph} & 8.52 (108) & 2454187.5 (108) & 26.5 (108) & 800 (109) & 0.9 (108) & 3.1e+21 & \nodata & 3.7$\pm0.2$ (108) & Y (110) & \nodata \\ +{\bf V2670 Oph} & 9.9 (111) & 2454613.11 (111) & 15: & 600 (112) & 1.3: (113) & 2.9e+21 & \nodata & \nodata & N (114) & \nodata \\ +{\bf V2671 Oph} & 11.1 (115) & 2454617.5 (115) & 8: & 1210 (116) & 2.0 (117) & 3.3e+21 & \nodata & \nodata & M (117) & \nodata \\ +{\bf V2672 Oph} & 10.0 (118) & 2455060.02 (118) & 2.3 (119) & 8000 (118) & 1.6$\pm0.1$ (119) & 4.0e+21 & \nodata & 19$\pm2$ (119) & \nodata & M \\ +V351 Pup & 6.5 (120) & 2448617.5 (120) & 16 (121) & \nodata & 0.72$\pm0.1$ (122) & 6.2e+21 & 0.1182 (123) & 2.7$\pm0.7$ (122) & N & \nodata \\ +{\bf V382 Nor} & 8.9 (124) & 2453447.5 (124) & 12 (40) & 1850 (23) & \nodata & 1.7e+22 & \nodata & \nodata & \nodata & \nodata \\ +V382 Vel & 2.85 (125) & 2451320.5 (125) & 4.5 (126) & 2400 (126) & 0.05: (126) & 3.4e+21 & 0.146126 (127) & 1.68$\pm0.3$ (126) & N & \nodata \\ +{\bf V407 Cyg} & 6.8 (128) & 2455266.314 (128) & 5.9 (129) & 2760 (129) & 0.5$\pm0.05$ (130) & 8.8e+21 & 15595 (131) & 2.7 (131) & \nodata & Y \\ +{\bf V458 Vul} & 8.24 (132) & 2454322.39 (132) & 7 (133) & 1750 (134) & 0.6 (135) & 3.6e+21 & 0.06812255 (136) & 8.5$\pm1.8$ (133) & N (135) & \nodata \\ +{\bf V459 Vul} & 7.57 (137) & 2454461.5 (137) & 18 (138) & 910 (139) & 1.0 (140) & 5.5e+21 & \nodata & 3.65$\pm1.35$ (138) & Y (140) & \nodata \\ +V4633 Sgr & 7.8 (141) & 2450895.5 (141) & 19$\pm3$ (142) & 1700 (143) & 0.21 (142) & 1.4e+21 & 0.125576 (144) & 8.9$\pm2.5$ (142) & N & \nodata \\ +{\bf V4643 Sgr} & 8.07 (145) & 2451965.867 (145) & 4.8 (146) & 4700 (147) & 1.67 (148) & 1.4e+22 & \nodata & 3 (148) & N & \nodata \\ +{\bf V4743 Sgr} & 5.0 (149) & 2452537.5 (149) & 9 (150) & 2400 (149) & 0.25 (151) & 1.2e+21 & 0.281 (152) & 3.9$\pm0.3$ (151) & N & \nodata \\ +{\bf V4745 Sgr} & 7.41 (153) & 2452747.5 (153) & 8.6 (154) & 1600 (155) & 0.1 (154) & 9.0e+20 & 0.20782 (156) & 14$\pm5$ (154) & \nodata & \nodata \\ +{\bf V476 Sct} & 10.3 (157) & 2453643.5 (157) & 15 (158) & \nodata & 1.9 (158) & 1.2e+22 & \nodata & 4$\pm1$ (158) & M (159) & \nodata \\ +{\bf V477 Sct} & 9.8 (160) & 2453655.5 (160) & 3 (160) & 2900 (161) & 1.2: (162) & 4e+21 & \nodata & \nodata & M (163) & \nodata \\ +{\bf V5114 Sgr} & 8.38 (164) & 2453081.5 (164) & 11 (165) & 2000 (23) & \nodata & 1.5e+21 & \nodata & 7.7$\pm0.7$ (165) & N (166) & \nodata \\ +{\bf V5115 Sgr} & 7.7 (167) & 2453459.5 (167) & 7 (40) & 1300 (168) & 0.53 (169) & 2.3e+21 & \nodata & \nodata & N (169) & \nodata \\ +{\bf V5116 Sgr} & 8.15 (170) & 2453556.91 (170) & 6.5 (171) & 970 (172) & 0.25 (173) & 1.5e+21 & 0.1238 (171) & 11$\pm3$ (173) & N (174) & \nodata \\ +{\bf V5558 Sgr} & 6.53 (175) & 2454291.5 (175) & 125 (176) & 1000 (177) & 0.80 (178) & 1.6e+22 & \nodata & 1.3$\pm0.3$ (176) & N (179) & \nodata \\ +{\bf V5579 Sgr} & 5.56 (180) & 2454579.62 (180) & 7: & 1500 (23) & 1.2 (181) & 3.3e+21 & \nodata & \nodata & Y (181) & \nodata \\ +{\bf V5583 Sgr} & 7.43 (182) & 2455051.07 (182) & 5: & 2300 (182) & 0.39 (30) & 2.0e+21 & \nodata & 10.5 & \nodata & \nodata \\ +{\bf V574 Pup} & 6.93 (183) & 2453332.22 (183) & 13 (184) & 2800 (184) & 0.5$\pm0.1$ & 6.2e+21 & \nodata & 6.5$\pm1$ & M (185) & \nodata \\ +{\bf V597 Pup} & 7.0 (186) & 2454418.75 (186) & 3: & 1800 (187) & 0.3 (188) & 5.0e+21 & 0.11119 (189) & \nodata & N (188) & \nodata \\ +{\bf V598 Pup} & 3.46 (14) & 2454257.79 (14) & 9$\pm1$ (190) & \nodata & 0.16 (190) & 1.4e+21 & \nodata & 2.95$\pm0.8$ (190) & \nodata & \nodata \\ +{\bf V679 Car} & 7.55 (191) & 2454797.77 (191) & 20: & \nodata & \nodata & 1.3e+22 & \nodata & \nodata & \nodata & \nodata \\ +{\bf V723 Cas} & 7.1 (192) & 2450069.0 (192) & 263 (2) & 600 (193) & 0.5 (194) & 2.35e+21 & 0.69 (195) & 3.86$\pm0.23$ (196) & N & \nodata \\ +V838 Her & 5 (197) & 2448340.5 (197) & 2 (198) & \nodata & 0.5$\pm0.1$ (198) & 2.6e+21 & 0.2975 (199) & 3$\pm1$ (198) & Y (200) & \nodata \\ +{\bf XMMSL1 J06} & 12 (201) & 2453643.5 (202) & 8$\pm2$ (202) & \nodata & 0.15 (203) & 8.7e+20 & \nodata & 50 & \nodata & \nodata \\ +\enddata +\end{deluxetable*} +\end{longrotatetable} + +A handy "cheat sheet" that provides the necessary \latex to produce 17 +different types of tables is available at \url{http://journals.aas.org/authors/aastex/aasguide.html#table_cheat_sheet}. + diff --git a/include/appendix4.md b/include/appendix4.md new file mode 100644 index 0000000..4b37647 --- /dev/null +++ b/include/appendix4.md @@ -0,0 +1,68 @@ +# IAU recommendations for nominal units + +The IAU 2015 resolution B3 defines nominal solar and planetary values by +establishing conversions between solar and planetary values and SI units. +The rational and specifications are given in \citet{2016AJ....152...41P}. +The recommended nominal conversion constants for \latex have been +incorporate into v6.31 to help authors follow the IAU resolution. + +The general commands take this form: + +\vskip12pt +\begin{center} +\begin{tabular}{@{\vrule height 14pt depth 6pt width0pt}lll} +Command&Example&Results\\ +\verb+\nom{}+&\verb+\nom{Q}+&\nom{Q}\\ +\verb+\Eenom{}+&\verb+\Eenom{Q}+&\Eenom{Q}\\ +\verb+\Epnom{}+&\verb+\Epnom{Q}+&\Epnom{Q}\\ +\verb+\Jenom{}+&\verb+\Jenom{Q}+&\Jenom{Q}\\ +\verb+\Jpnom{}+&\verb+\Jpnom{Q}+&\Jpnom{Q}\\ +\end{tabular} +\end{center} +\vskip12pt + +which can be used for any units the author requires. Examples of +the most common uses would be: + +\vskip12pt +\begin{tabular}{@{\vrule height 14pt depth 6pt width 0pt}llllp{3in}} +1.&\verb+\nom{(GM)}+& \nom{(GM)} &=& nominal solar mass parameter\\ +2.&\verb+\nom{R}+&\nom{R} &=& nominal solar radius\\ +3.&\verb+\nom{S}+& \nom{S}&=& nominal total solar irradiance\\ +4.&\verb+\nom{L}+& \nom{L} &=&nominal solar luminosity\\ +\end{tabular} +\vskip12pt + +AASTeX v6.31 also contains specific commands for other commonly used +units. These are: + +\vskip24pt +\begin{tabular}{@{\vrule height 14pt depth 6pt width 0pt}llllp{3in}} +1.&\verb+\nomSolarEffTemp+& \nomSolarEffTemp&=& nominal solar effective temperature\\ +2.&\verb+\nomTerrEqRadius+&\nomTerrEqRadius &=& nominal terrestrial +equatorial radius\\ +&\verb+\nomTerrPolarRadius+ &\nomTerrPolarRadius &=& nominal +terrestrial polar radius\\ +&\verb+\nomTerrEqRadius+&\nomTerrEqRadius&& should be used if equatorial +vs.~polar radius is not explicitly specified.\\ +3.&\verb+\nomJovianEqRadius+&\nomJovianEqRadius&=& nominal one-bar equatorial radii of +Jupiter\\ +&\verb+\nomJovianPolarRadius+&\nomJovianPolarRadius &=& nominal polar radii of Jupiter\\ +&\verb+\nomJovianEqRadius+&\nomJovianEqRadius&& should be used if Jovian equatorial +vs.~polar radius is not explicitly specified.\\ +4.&\verb+\nomTerrMass+ &\nomTerrMass &=& nominal terrestrial mass +parameter\\ +&\verb+\nomJovianMass+ &\nomJovianMass &=& nominal Jovian mass parameter\\ +\end{tabular} +\vskip12pt + +All of these commands work equally well in text and math mode. + +# Using Chinese, Japanese, and Korean characters + +Authors have the option to include names in Chinese, Japanese, or Korean (CJK) +characters in addition to the English name. The names will be displayed +in parentheses after the English name. The way to do this in AASTeX is to +use the CJK package available at \url{https://ctan.org/pkg/cjk?lang=en}. +Further details on how to implement this and solutions for common problems, +please go to \url{https://journals.aas.org/nonroman/}. diff --git a/include/appendix5.md b/include/appendix5.md new file mode 100644 index 0000000..a636562 --- /dev/null +++ b/include/appendix5.md @@ -0,0 +1,8 @@ +# Using Chinese, Japanese, and Korean characters + +Authors have the option to include names in Chinese, Japanese, or Korean (CJK) +characters in addition to the English name. The names will be displayed +in parentheses after the English name. The way to do this in AASTeX is to +use the CJK package available at \url{https://ctan.org/pkg/cjk?lang=en}. +Further details on how to implement this and solutions for common problems, +please go to \url{https://journals.aas.org/nonroman/}. diff --git a/manuscript.bib b/manuscript.bib index 0de907d..8093e24 100644 --- a/manuscript.bib +++ b/manuscript.bib @@ -85,3 +85,233 @@ year = {2022}, file = {Snapshot:/home/aku/.zotero/zotero/cj95rjne.default/zotero/storage/DKAK9X7J/basic-syntax.html:text/html}, } +@ARTICLE{2018AJ....156..123A, + author = {{Astropy Collaboration} and {Price-Whelan}, A.~M. and {Sip{\H{o}}cz}, B.~M. and {G{\"u}nther}, H.~M. and {Lim}, P.~L. and {Crawford}, S.~M. and {Conseil}, S. and {Shupe}, D.~L. and {Craig}, M.~W. and {Dencheva}, N. and {Ginsburg}, A. and {VanderPlas}, J.~T. and {Bradley}, L.~D. and {P{\'e}rez-Su{\'a}rez}, D. and {de Val-Borro}, M. and {Aldcroft}, T.~L. and {Cruz}, K.~L. and {Robitaille}, T.~P. and {Tollerud}, E.~J. and {Ardelean}, C. and {Babej}, T. and {Bach}, Y.~P. and {Bachetti}, M. and {Bakanov}, A.~V. and {Bamford}, S.~P. and {Barentsen}, G. and {Barmby}, P. and {Baumbach}, A. and {Berry}, K.~L. and {Biscani}, F. and {Boquien}, M. and {Bostroem}, K.~A. and {Bouma}, L.~G. and {Brammer}, G.~B. and {Bray}, E.~M. and {Breytenbach}, H. and {Buddelmeijer}, H. and {Burke}, D.~J. and {Calderone}, G. and {Cano Rodr{\'\i}guez}, J.~L. and {Cara}, M. and {Cardoso}, J.~V.~M. and {Cheedella}, S. and {Copin}, Y. and {Corrales}, L. and {Crichton}, D. and {D'Avella}, D. and {Deil}, C. and {Depagne}, {\'E}. and {Dietrich}, J.~P. and {Donath}, A. and {Droettboom}, M. and {Earl}, N. and {Erben}, T. and {Fabbro}, S. and {Ferreira}, L.~A. and {Finethy}, T. and {Fox}, R.~T. and {Garrison}, L.~H. and {Gibbons}, S.~L.~J. and {Goldstein}, D.~A. and {Gommers}, R. and {Greco}, J.~P. and {Greenfield}, P. and {Groener}, A.~M. and {Grollier}, F. and {Hagen}, A. and {Hirst}, P. and {Homeier}, D. and {Horton}, A.~J. and {Hosseinzadeh}, G. and {Hu}, L. and {Hunkeler}, J.~S. and {Ivezi{\'c}}, {\v{Z}}. and {Jain}, A. and {Jenness}, T. and {Kanarek}, G. and {Kendrew}, S. and {Kern}, N.~S. and {Kerzendorf}, W.~E. and {Khvalko}, A. and {King}, J. and {Kirkby}, D. and {Kulkarni}, A.~M. and {Kumar}, A. and {Lee}, A. and {Lenz}, D. and {Littlefair}, S.~P. and {Ma}, Z. and {Macleod}, D.~M. and {Mastropietro}, M. and {McCully}, C. and {Montagnac}, S. and {Morris}, B.~M. and {Mueller}, M. and {Mumford}, S.~J. and {Muna}, D. and {Murphy}, N.~A. and {Nelson}, S. and {Nguyen}, G.~H. and {Ninan}, J.~P. and {N{\"o}the}, M. and {Ogaz}, S. and {Oh}, S. and {Parejko}, J.~K. and {Parley}, N. and {Pascual}, S. and {Patil}, R. and {Patil}, A.~A. and {Plunkett}, A.~L. and {Prochaska}, J.~X. and {Rastogi}, T. and {Reddy Janga}, V. and {Sabater}, J. and {Sakurikar}, P. and {Seifert}, M. and {Sherbert}, L.~E. and {Sherwood-Taylor}, H. and {Shih}, A.~Y. and {Sick}, J. and {Silbiger}, M.~T. and {Singanamalla}, S. and {Singer}, L.~P. and {Sladen}, P.~H. and {Sooley}, K.~A. and {Sornarajah}, S. and {Streicher}, O. and {Teuben}, P. and {Thomas}, S.~W. and {Tremblay}, G.~R. and {Turner}, J.~E.~H. and {Terr{\'o}n}, V. and {van Kerkwijk}, M.~H. and {de la Vega}, A. and {Watkins}, L.~L. and {Weaver}, B.~A. and {Whitmore}, J.~B. and {Woillez}, J. and {Zabalza}, V. and {Astropy Contributors}}, + title = "{The Astropy Project: Building an Open-science Project and Status of the v2.0 Core Package}", + journal = {\aj}, + keywords = {methods: data analysis, methods: miscellaneous, methods: statistical, reference systems, Astrophysics - Instrumentation and Methods for Astrophysics}, + year = 2018, + month = sep, + volume = {156}, + number = {3}, + eid = {123}, + pages = {123}, + doi = {10.3847/1538-3881/aabc4f}, +archivePrefix = {arXiv}, + eprint = {1801.02634}, + primaryClass = {astro-ph.IM}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2018AJ....156..123A}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@ARTICLE{2013A&A...558A..33A, + author = {{Astropy Collaboration} and {Robitaille}, Thomas P. and + {Tollerud}, Erik J. and {Greenfield}, Perry and {Droettboom}, Michael and + {Bray}, Erik and {Aldcroft}, Tom and {Davis}, Matt and + {Ginsburg}, Adam and {Price-Whelan}, Adrian M. and + {Kerzendorf}, Wolfgang E. and {Conley}, Alexander and {Crighton}, Neil and + {Barbary}, Kyle and {Muna}, Demitri and {Ferguson}, Henry and + {Grollier}, Fr{\'e}d{\'e}ric and {Parikh}, Madhura M. and + {Nair}, Prasanth H. and {Unther}, Hans M. and {Deil}, Christoph and + {Woillez}, Julien and {Conseil}, Simon and {Kramer}, Roban and + {Turner}, James E.~H. and {Singer}, Leo and {Fox}, Ryan and + {Weaver}, Benjamin A. and {Zabalza}, Victor and {Edwards}, Zachary I. and + {Azalee Bostroem}, K. and {Burke}, D.~J. and {Casey}, Andrew R. and + {Crawford}, Steven M. and {Dencheva}, Nadia and {Ely}, Justin and + {Jenness}, Tim and {Labrie}, Kathleen and {Lim}, Pey Lian and + {Pierfederici}, Francesco and {Pontzen}, Andrew and {Ptak}, Andy and + {Refsdal}, Brian and {Servillat}, Mathieu and {Streicher}, Ole}, + title = "{Astropy: A community Python package for astronomy}", + journal = {\aap}, + keywords = {methods: data analysis, methods: miscellaneous, virtual observatory tools, Astrophysics - Instrumentation and Methods for Astrophysics}, + year = "2013", + month = "Oct", + volume = {558}, + eid = {A33}, + pages = {A33}, + doi = {10.1051/0004-6361/201322068}, +archivePrefix = {arXiv}, + eprint = {1307.6212}, + primaryClass = {astro-ph.IM}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2013A&A...558A..33A}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@ARTICLE{1996A&AS..117..393B, + author = {{Bertin}, E. and {Arnouts}, S.}, + title = "{SExtractor: Software for source extraction.}", + journal = {\aaps}, + keywords = {METHODS: DATA ANALYSIS, TECHNIQUES: IMAGE PROCESSING, GALAXIES: PHOTOMETRY}, + year = "1996", + month = "Jun", + volume = {117}, + pages = {393-404}, + doi = {10.1051/aas:1996164}, + adsurl = {https://ui.adsabs.harvard.edu/abs/1996A&AS..117..393B}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@ARTICLE{2018AJ....156...82C, + author = {{Cloutier}, Ryan and {Doyon}, Ren{\'e} and {Bouchy}, Francois and + {H{\'e}brard}, Guillaume}, + title = "{Quantifying the Observational Effort Required for the Radial Velocity Characterization of TESS Planets}", + journal = {\aj}, + keywords = {methods: analytical, planets and satellites: detection, planets and satellites: fundamental parameters, techniques: radial velocities, Astrophysics - Earth and Planetary Astrophysics}, + year = "2018", + month = "Aug", + volume = {156}, + number = {2}, + eid = {82}, + pages = {82}, + doi = {10.3847/1538-3881/aacea9}, +archivePrefix = {arXiv}, + eprint = {1807.01263}, + primaryClass = {astro-ph.EP}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2018AJ....156...82C}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@ARTICLE{2015ApJ...805...23C, + author = {{Corrales}, Lia}, + title = "{X-Ray Scattering Echoes and Ghost Halos from the Intergalactic Medium: Relation to the Nature of AGN Variability}", + journal = {\apj}, + keywords = {accretion, accretion disks, dust, extinction, quasars: general, intergalactic medium, X-rays: ISM, Astrophysics - High Energy Astrophysical Phenomena, Astrophysics - Astrophysics of Galaxies}, + year = "2015", + month = "May", + volume = {805}, + number = {1}, + eid = {23}, + pages = {23}, + doi = {10.1088/0004-637X/805/1/23}, +archivePrefix = {arXiv}, + eprint = {1503.01475}, + primaryClass = {astro-ph.HE}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2015ApJ...805...23C}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@ARTICLE{2013RMxAA..49..137F, + author = {{Ferland}, G.~J. and {Porter}, R.~L. and {van Hoof}, P.~A.~M. and + {Williams}, R.~J.~R. and {Abel}, N.~P. and {Lykins}, M.~L. and + {Shaw}, G. and {Henney}, W.~J. and {Stancil}, P.~C.}, + title = "{The 2013 Release of Cloudy}", + journal = {\rmxaa}, + keywords = {atomic processes, galaxies: active, methods: numerical, molecular processes, radiation mechanisms: general, Astrophysics - Galaxy Astrophysics, Astrophysics - Cosmology and Extragalactic Astrophysics, Astrophysics - Instrumentation and Methods for Astrophysics}, + year = "2013", + month = "Apr", + volume = {49}, + pages = {137-163}, +archivePrefix = {arXiv}, + eprint = {1302.4485}, + primaryClass = {astro-ph.GA}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2013RMxAA..49..137F}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@INPROCEEDINGS{1989BAAS...21..780H, + author = {{Hanisch}, R.~J. and {Biemesderfer}, C.~D.}, + title = "{T$_{E}$X and LAT$_{E}$X Macro Definition Files for Astronomical Publications}", + booktitle = {\baas}, + year = "1989", + month = "Mar", + pages = {780}, + adsurl = {https://ui.adsabs.harvard.edu/abs/1989BAAS...21..780H}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@BOOK{lamport94, + author = {{Lamport}, L.}, + title = "{LaTeX: A Document Preparation System}", + publisher = {Addison-Wesley Professional}, + year = "1994", + edition = {2}, + isbn = {0201529831} +} + +@ARTICLE{2018ApJ...868L..33L, + author = {{Li}, Leping and {Zhang}, Jun and {Peter}, Hardi and + {Chitta}, Lakshmi Pradeep and {Su}, Jiangtao and {Song}, Hongqiang and + {Xia}, Chun and {Hou}, Yijun}, + title = "{Quasi-periodic Fast Propagating Magnetoacoustic Waves during the Magnetic Reconnection Between Solar Coronal Loops}", + journal = {\apj}, + keywords = {magnetic reconnection, plasmas, Sun: corona, Sun: UV radiation, waves, Astrophysics - Solar and Stellar Astrophysics}, + year = "2018", + month = "Dec", + volume = {868}, + number = {2}, + eid = {L33}, + pages = {L33}, + doi = {10.3847/2041-8213/aaf167}, +archivePrefix = {arXiv}, + eprint = {1811.08553}, + primaryClass = {astro-ph.SR}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2018ApJ...868L..33L}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@ARTICLE{2016AJ....152...41P, + author = {{Pr{\v{s}}a}, Andrej and {Harmanec}, Petr and {Torres}, Guillermo and + {Mamajek}, Eric and {Asplund}, Martin and {Capitaine}, Nicole and + {Christensen-Dalsgaard}, J{\o}rgen and {Depagne}, {\'E}ric and + {Haberreiter}, Margit and {Hekker}, Saskia}, + title = "{Nominal Values for Selected Solar and Planetary Quantities: IAU 2015 Resolution B3}", + journal = {\aj}, + keywords = {planets and satellites: fundamental parameters, standards, stars: fundamental parameters, stars: general, Sun: fundamental parameters, Astrophysics - Solar and Stellar Astrophysics, Astrophysics - Earth and Planetary Astrophysics, Astrophysics - Instrumentation and Methods for Astrophysics}, + year = "2016", + month = "Aug", + volume = {152}, + number = {2}, + eid = {41}, + pages = {41}, + doi = {10.3847/0004-6256/152/2/41}, +archivePrefix = {arXiv}, + eprint = {1605.09788}, + primaryClass = {astro-ph.SR}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2016AJ....152...41P}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@ARTICLE{2011ApJS..197...31S, + author = {{Schwarz}, Greg J. and {Ness}, Jan-Uwe and {Osborne}, J.~P. and + {Page}, K.~L. and {Evans}, P.~A. and {Beardmore}, A.~P. and + {Walter}, Frederick M. and {Helton}, L. Andrew and + {Woodward}, Charles E. and {Bode}, Mike and {Starrfield}, Sumner and + {Drake}, Jeremy J.}, + title = "{Swift X-Ray Observations of Classical Novae. II. The Super Soft Source Sample}", + journal = {\apjs}, + keywords = {novae, cataclysmic variables, ultraviolet: stars, X-rays: stars, Astrophysics - Solar and Stellar Astrophysics, Astrophysics - High Energy Astrophysical Phenomena}, + year = "2011", + month = "Dec", + volume = {197}, + number = {2}, + eid = {31}, + pages = {31}, + doi = {10.1088/0067-0049/197/2/31}, +archivePrefix = {arXiv}, + eprint = {1110.6224}, + primaryClass = {astro-ph.SR}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2011ApJS..197...31S}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} + +@ARTICLE{2014ApJ...793..127V, + author = {{Vogt}, Fr{\'e}d{\'e}ric P.~A. and {Dopita}, Michael A. and + {Kewley}, Lisa J. and {Sutherland}, Ralph S. and + {Scharw{\"a}chter}, Julia and {Basurah}, Hassan M. and {Ali}, Alaa and + {Amer}, Morsi A.}, + title = "{Galaxy Emission Line Classification Using Three-dimensional Line Ratio Diagrams}", + journal = {\apj}, + keywords = {galaxies: abundances, galaxies: general, galaxies: Seyfert, galaxies: starburst, H II regions, ISM: lines and bands, Astrophysics - Astrophysics of Galaxies}, + year = "2014", + month = "Oct", + volume = {793}, + number = {2}, + eid = {127}, + pages = {127}, + doi = {10.1088/0004-637X/793/2/127}, +archivePrefix = {arXiv}, + eprint = {1406.5186}, + primaryClass = {astro-ph.GA}, + adsurl = {https://ui.adsabs.harvard.edu/abs/2014ApJ...793..127V}, + adsnote = {Provided by the SAO/NASA Astrophysics Data System} +} diff --git a/manuscript.md b/manuscript.md index 6765982..8023668 100644 --- a/manuscript.md +++ b/manuscript.md @@ -52,8 +52,13 @@ linkDir: - Figure - Output appendix: - - appendix/1 - - appendix/2 + - include/appendix1 + - include/appendix2 + - include/appendix3 + - include/appendix4 + - include/appendix5 +graphicpaths: + - Figure abstract: | This example manuscript is intended to serve as a tutorial and template for authors to use when writing their own AAS Journal articles. The manuscript @@ -86,16 +91,22 @@ keywords: - Ultraviolet astronomy(1736) - History of astronomy(1868) - Interdisciplinary astronomy(804) -facilities: "HST(STIS)" - +facilities: "HST(STIS), Swift(XRT and UVOT), AAVSO, CTIO:1.3m, CTIO:1.5m, CXO" acknowledgements: - Part of this work was supported by the German - *Deutsche Forschungsgemeinschaft, DFG* project - number Ts 17/2--1. + We thank all the people that have made this AASTeX what it is today. This + includes but not limited to Bob Hanisch, Chris Biemesderfer, Lee Brotzman, + Pierre Landau, Arthur Ogawa, Maxim Markevitch, Alexey Vikhlinin and Amy + Hendrickson. Also special thanks to David Hogg and Daniel Foreman-Mackey + for the new "modern" style design. Considerable help was provided via bug + reports and hacks from numerous people including Patricio Cubillos, Alex + Drlica-Wagner, Sean Lake, Michele Bannister, Peter Williams, and Jonathan + Gagne. header-includes: | \usepackage{chemfig} \newcommand\mC[1]{\multicolumn{1}{c}{#1}} - \newcommand\latex{\LaTeX\xspace } + \newcommand{\vdag}{(v)^\dagger} + \newcommand\aastex{AAS\TeX} + \newcommand\latex{\LaTeX\xspace} --- @@ -889,8 +900,8 @@ encapsulated postscript (EPS) or portable document format (PDF) files, \begin{enumerate} \item ORCID support for preprints, \item improved author, affiliation and collaboration mark up, - \item reintroduced the old AASTeX v5.2 {\tt\string\received}, {\tt\string\revised}, {\tt\string\accepted}, and {\tt\string\published} commands plus added the new {\tt\string\submitjournal} command to document which AAS Journal the manuscript was submitted to, plus - \item new typeset style options including {\tt\string modern}. + \item reintroduced the old AASTeX v5.2 `\received`, `\revised`, `\accepted`, and `\published` commands plus added the new `\submitjournal` command to document which AAS Journal the manuscript was submitted to, plus + \item new typeset style options including ` modern`. \end{enumerate} \item{v6.2} \begin{enumerate} @@ -898,20 +909,20 @@ encapsulated postscript (EPS) or portable document format (PDF) files, \item Titles no longer put in all caps, \item No page skip between the title page and article body, \item re-introduce RevTeX's widetext environment for long lines in two column style formats, and - \item upgrade to the {\tt\string\doi} command. + \item upgrade to the `\doi` command. \end{enumerate} \item{v6.3} \begin{enumerate} - \item New {\tt\string interactive} environment to highlight interactive figures (see Section \ref{animation}), + \item New ` interactive` environment to highlight interactive figures (see Section \ref{animation}), \item Improved collaboration commands, - \item New {\tt\string anonymous} style to keep the authors, affiliations and acknowledgments from showing in the compiled pdf for dual anonymous review, and + \item New ` anonymous` style to keep the authors, affiliations and acknowledgments from showing in the compiled pdf for dual anonymous review, and \item Adoptions of IAU approved syntax for nominal units, see Section \ref{nominal}. \end{enumerate} \item{v6.31} \begin{enumerate} - \item Fixes a bug in the {\tt\string anonymous} style for dual anonymous review. - \item Improves line numbering with the {\tt\string linenumbers} style around equations due to the amsmath and lineno package compatibility issues. - \item Depreciate the {\tt\string \\acknowledgment} command in favor of the {\tt\string acknowledgment} environment. + \item Fixes a bug in the ` anonymous` style for dual anonymous review. + \item Improves line numbering with the ` linenumbers` style around equations due to the amsmath and lineno package compatibility issues. + \item Depreciate the ` \\acknowledgment` command in favor of the ` acknowledgment` environment. \end{enumerate} \end{itemize} @@ -941,41 +952,45 @@ since figures and tables, see Section \ref{sec:floats}, will span the entire page, reducing the need for address float sizing. To invoke a two column style similar to the what is produced in -the published PDF copy use \\ +the published PDF copy use -\noindent {\tt\string\documentclass[twocolumn]\{aastex631\}}. \\ +~~~ +\documentclass[twocolumn]{aastex631} +~~~ -\noindent Note that in the two column style figures and tables will only -span one column unless specifically ordered across both with the ``*'' flag, -e.g. \\ +Note that in the two column style figures and tables will only +span one column unless specifically ordered across both with the ``*`` flag, +e.g. -\noindent{\tt\string\begin\{figure*\}} ... {\tt\string\end\{figure*\}}, \\ -\noindent{\tt\string\begin\{table*\}} ... {\tt\string\end\{table*\}}, and \\ -\noindent{\tt\string\begin\{deluxetable*\}} ... {\tt\string\end\{deluxetable*\}}. \\ +~~~ +\begin{figure*} ... \end{figure*}, +\begin{table*} ... \end{table*}, +\begin{deluxetable*} ... \end{deluxetable*}. +~~~ -\noindent This option is ignored in the onecolumn style. +This option is ignored in the onecolumn style. Some other style options are outlined in the commented sections of this article. Any combination of style options can be used. Two style options that are needed to fully use the new revision tracking -feature, see Section \ref{sec:highlight}, are {\tt\string linenumbers} which +feature, see Section \ref{sec:highlight}, are `linenumbers` which uses the lineno style file to number each article line in the left margin and -{\tt\string trackchanges} which controls the revision and commenting highlight +`trackchanges` which controls the revision and commenting highlight output. -There is also a new {\tt\string modern} option that uses a Daniel +There is also a new ` modern` option that uses a Daniel Foreman-Mackey and David Hogg design to produce stylish, single column output that has wider left and right margins. It is designed to have fewer words per line to improve reader retention. It also looks better on devices with smaller displays such as smart phones. -The {\tt\string anonymous} option will prevent the author and affiliations +The ` anonymous` option will prevent the author and affiliations from being shown in the compiled pdf copy. This option allows the author to keep this critical information in the latex file but prevent the reviewer from seeing it during peer review if dual anonymous review (DAR) is requested. Likewise, acknowledgments can also be hidden if placed in the new -{\tt\string\begin\{acknowledgments\}} ... {\tt\string\end\{acknowledgments\}} +`\begin{acknowledgments} ... \end{acknowledgments` environment. The use of this option is highly recommended for PSJ submissions. Advice for anonymizing your manuscript for DAR is provided at \url{https://journals.aas.org/manuscript-preparation/#dar}. @@ -986,7 +1001,7 @@ Floats are non-text items that generally can not be split over a page. They also have captions and can be numbered for reference. Primarily these are figures and tables but authors can define their own. \latex tries to place a float where indicated in the manuscript but will move it later if -there is not enough room at that location, hence the term ``float''. +there is not enough room at that location, hence the term ``float``. Authors are encouraged to embed their tables and figures within the text as they are mentioned. Please do not place the figures and text at the end of @@ -1010,30 +1025,29 @@ their floats there are some techniques that can be used. The simplest solution is to placing a float earlier in the text to get the position right but this option will break down if the manuscript is altered. A better method is to force \latex to place a -float in a general area with the use of the optional {\tt\string [placement -specifier]} parameter for figures and tables. This parameter goes after -{\tt\string \begin\{figure\}}, {\tt\string \begin\{table\}}, and -{\tt\string \begin\{deluxetable\}}. The main arguments the specifier takes -are ``h'', ``t'', ``b'', and ``!''. These tell \latex to place the float +float in a general area with the use of the optional `[placement specifier]` +parameter for figures and tables. This parameter goes after +` \begin{figure}`, ` \begin{table}`, and +` \begin{deluxetable}`. The main arguments the specifier takes +are ``h``, ``t``, ``b``, and ``!``. These tell \latex to place the float \underline{h}ere (or as close as possible to this location as possible), at the \underline{t}op of the page, and at the \underline{b}ottom of the page. -The last argument, ``!'', tells \latex to override its internal method of +The last argument, `!`, tells \latex to override its internal method of calculating the float position. A sequence of rules can be created by -using multiple arguments. For example, {\tt\string \begin\{figure\}[htb!]} +using multiple arguments. For example, ` \begin{figure[htb!]}` tells \latex to try the current location first, then the top of the page and finally the bottom of the page without regard to what it thinks the proper position should be. Many of the tables and figures in this article use a placement specifier to set their positions. -Note that the \latex {\tt\string tabular} environment is not a float. Only -when a {\tt\string tabular} is surrounded by {\tt\string\begin\{table\}} ... -{\tt\string\end\{table\}} is it a true float and the rules and suggestions +Note that the \latex ` tabular` environment is not a float. Only +when a ` tabular` is surrounded by `\begin{table} ...\end{table}` is it a true float and the rules and suggestions above apply. In AASTeX v6.31 all deluxetables are float tables and thus if they are longer than a page will spill off the bottom. Long deluxetables should -begin with the {\tt\string\startlongtable} command. This initiates a -longtable environment. Authors might have to use {\tt\string\clearpage} to +begin with the `\startlongtable` command. This initiates a +longtable environment. Authors might have to use `\clearpage` to isolate a long table or optimally place it within the surrounding text. ## Tables @@ -1059,13 +1073,11 @@ readable tables using the online tool at table construction easier and the resulting display better for AAS Journal authors. The items are: -\begin{enumerate} -\item Declaring math mode in specific columns, -\item Column decimal alignment, -\item Automatic column header numbering, -\item Hiding columns, and -\item Splitting wide tables into two or three parts. -\end{enumerate} +1. Declaring math mode in specific columns, +2. Column decimal alignment, +3. Automatic column header numbering, +4. Hiding columns, and +5. Splitting wide tables into two or three parts. Full details on how to create each type are given in the following sections. Additional details are available in the AASTeX @@ -1075,9 +1087,9 @@ guidelines at \url{http://journals.aas.org/authors/aastex.html} Both the \latex tabular and \aastex deluxetable require an argument to define the alignment and number of columns. The most common values are -``c'', ``l'' and ``r'' for \underline{c}enter, \underline{l}eft, and +``c``, ``l`` and ``r`` for \underline{c}enter, \underline{l}eft, and \underline{r}ight justification. If these values are capitalized, e.g. -``C'', ``L'', or ``R'', then that specific column will automatically be in math +``C``, ``L``, or ``R``, then that specific column will automatically be in math mode meaning that \$s are not required. Note that having embedded dollar signs in the table does not affect the output. @@ -1085,55 +1097,55 @@ signs in the table does not affect the output. Aligning a column by the decimal point can be difficult with only center, left, and right justification options. It is possible to use phantom calls -in the data, e.g. {\tt\string\phn}, to align columns by hand but this can +in the data, e.g. `\phn`, to align columns by hand but this can be tedious in long or complex tables. To address this \aastex introduces -the {\tt\string\decimals} command and a new column justification option, -``D'', to align data in that column on the decimal. In deluxetable the -{\tt\string\decimals} command is invoked before the {\tt\string\startdata} +the `\decimals` command and a new column justification option, +`D`, to align data in that column on the decimal. In deluxetable the +`\decimals` command is invoked before the `\startdata` call but can be anywhere in \latex's tabular environment. Two other important thing to note when using decimal alignment is that each decimal column \textit{must end with a space before the ampersand}, e.g. -``\&\&'' is not allowed. Empty decimal columns are indicated with a decimal, -e.g. ``.''. Do not use deluxetable's {\tt\string\nodata} command. +``&&`` is not allowed. Empty decimal columns are indicated with a decimal, +e.g. ``.``. Do not use deluxetable's `\nodata` command. -The ``D'' alignment token works by splitting the column into two parts on the +The ``D`` alignment token works by splitting the column into two parts on the decimal. While this is invisible to the user one must be aware of how it works so that the headers are accounted for correctly. All decimal column headers need to span two columns to get the alignment correct. This can be -done with a multicolumn call, e.g {\tt\string\multicolumn2c\{\}} or -{\tt\string\multicolumn\{2\}\{c\}\{\}}, or use the new -{\tt\string\twocolhead\{\}} command in deluxetable. Since \latex is +done with a multicolumn call, e.g `\multicolumn2c{}` or +`\multicolumn{2}{c}{}`, or use the new +`\twocolhead{}` command in deluxetable. Since \latex is splitting these columns into two it is important to get the table width right so that they appear joined on the page. You may have to run the \latex compiler twice to get it right. ### Automatic column header numbering -The command {\tt\string\colnumbers} can be included to automatically number +The command `\colnumbers` can be included to automatically number each column as the last row in the header. Per the AAS Journal table format standards, each column index numbers will be surrounded by parentheses. In -a \latex tabular environment the {\tt\string\colnumbers} should be invoked +a \latex tabular environment the `\colnumbers` should be invoked at the location where the author wants the numbers to appear, e.g. after the last line of specified table header rows. In deluxetable this command -has to come before {\tt\string\startdata}. {\tt\string\colnumbers} will -not increment for columns hidden by the ``h'' command, see Section +has to come before `\startdata`. `\colnumbers` will +not increment for columns hidden by the ``h`` command, see Section \ref{subsubsec:hide}. Note that when using decimal alignment in a table the command -{\tt\string\decimalcolnumbers} must be used instead of -{\tt\string\colnumbers} and {\tt\string\decimals}. +`\decimalcolnumbers` must be used instead of +`\colnumbers` and `\decimals`. ### Hiding columns Entire columns can be \underline{h}idden from display simply by changing -the specified column identifier to ``h''. In the \latex tabular environment +the specified column identifier to ``h``. In the \latex tabular environment this column identifier conceals the entire column including the header columns. In \aastex's deluxetables the header row is specifically -declared with the {\tt\string\tablehead} call and each header column is -marked with {\tt\string\colhead} call. In order to make a specific header -disappear with the ``h'' column identifier in deluxetable use -{\tt\string\nocolhead} instead to suppress that particular column header. +declared with the `\tablehead` call and each header column is +marked with `\colhead` call. In order to make a specific header +disappear with the ``h`` column identifier in deluxetable use +`\nocolhead` instead to suppress that particular column header. Authors can use this option in many different ways. Since column data can be easily suppressed authors can include extra information and hid it @@ -1151,11 +1163,12 @@ Messier Objects and illustrates how many of these new features can be used together. It has automatic column numbering, decimal alignment of the distances, and one concealed column. The Common name column is the third in the \latex deluxetable but does not appear when the article -is compiled. This hidden column can be shown simply by changing the ``h'' in +is compiled. This hidden column can be shown simply by changing the ``h`` in the column identifier preamble to another valid value. This table also -uses {\tt\string\tablenum} to renumber the table because a \latex tabular +uses `\tablenum` to renumber the table because a \latex tabular table was inserted before it. +~~~ \begin{deluxetable*}{cchlDlc} \tablenum{1} \tablecaption{Fun facts about the first 10 messier objects\label{tab:messier}} @@ -1179,12 +1192,13 @@ M8 & NGC 6523 & Lagoon Nebula & Nebula with cluster & 1.25 & Sagittarius & 6.0 \ M9 & NGC 6333 & Messier 9 & Cluster, globular & 7.91 & Ophiuchus & 8.4 \\ M10 & NGC 6254 & Messier 10 & Cluster, globular & 4.42 & Ophiuchus & 6.4 \\ \enddata -\tablecomments{This table ``hides'' the third column in the \latex when compiled. +\tablecomments{This table ``hides`` the third column in the \latex when compiled. The Distance is also centered on the decimals. Note that when using decimal -alignment you need to include the {\tt\string\decimals} command before -{\tt\string\startdata} and all of the values in that column have to have a +alignment you need to include the `\decimals` command before +`startdata` and all of the values in that column have to have a space before the next ampersand.} -\end{deluxetable*} +end{deluxetable*} +~~~ ### Splitting a table into multiple horizontal components @@ -1193,19 +1207,19 @@ no reason why tables can not be as wide as authors need them to be. However, there are some artificial limitations based on the width of a print page. The old way around this limitation was to rotate into landscape mode and use the smallest available table font -sizes, e.g. {\tt\string\tablewidth}, to get the table to fit. +sizes, e.g. `\tablewidth`, to get the table to fit. Unfortunately, this was not always enough but now along with the hide column option outlined in Section \ref{subsubsec:hide} there is a new way to break a table into two or three components so that it flows down a page by invoking a new table type, splittabular or splitdeluxetable. Within these -tables a new ``B'' column separator is introduced. Much like the vertical -bar option, ``$\vert$'', that produces a vertical table lines -the new ``B'' separator indicates where to \underline{B}reak -a table. Up to two ``B''s may be included. +tables a new ``B`` column separator is introduced. Much like the vertical +bar option, ``$\vert$``, that produces a vertical table lines +the new ``B`` separator indicates where to \underline{B}reak +a table. Up to two ``B``s may be included. Table 2 % \ref{tab:deluxesplit} this freaks it out when it is used! shows how to split a wide deluxetable into three parts with -the {\tt\string\splitdeluxetable} command. The {\tt\string\colnumbers} +the `\splitdeluxetable` command. The `\colnumbers` option is on to show how the automatic column numbering carries through the second table component, see Section \ref{subsubsec:autonumber}. @@ -1241,7 +1255,7 @@ V}} & \colhead{Si\,{\footnotesize IV}} & \colhead{C\,{\footnotesize IV}} & \enddata \tablecomments{This is an example of how to split a deluxetable. You can split any table with this command into two or three parts. The location of -the split is given by the author based on the placement of the ``B'' +the split is given by the author based on the placement of the ``B`` indicators in the column identifier preamble. For more information please look at the new \aastex instructions.} \end{splitdeluxetable*} @@ -1274,23 +1288,23 @@ of \aastex. ## General figures -\aastex has a {\tt\string\plotone} command to display a figure consisting +\aastex has a `\plotone` command to display a figure consisting of one EPS/PDF file. Figure \ref{fig:general} is an example which shows the approximate changes in the subscription costs and author publication charges from 1991 to 2013 in the AAS Journals. For a general figure -consisting of two EPS/PDF files the {\tt\string\plottwo} command can be +consisting of two EPS/PDF files the `\plottwo` command can be used to position the two image files side by side. -Both {\tt\string\plotone} and {\tt\string\plottwo} take a -{\tt\string\caption} and an optional {\tt\string\figurenum} command to +Both `\plotone` and `\plottwo` take a +`\caption` and an optional `\figurenum` command to specify the figure number\footnote{It is better to not use -{\tt\string\figurenum} and let \latex auto-increment all the figures. If you +`\figurenum` and let \latex auto-increment all the figures. If you do use this command you need to mark all of them accordingly.}. Each is -based on the {\tt\string graphicx} package command, -{\tt\string\includegraphics}. Authors are welcome to use -{\tt\string\includegraphics} along with its optional arguments that control +based on the ` graphicx` package command, +`\includegraphics`. Authors are welcome to use +`\includegraphics` along with its optional arguments that control the height, width, scale, and position angle of a file within the figure. -More information on the full usage of {\tt\string\includegraphics} can be +More information on the full usage of `\includegraphics` can be found at \break \url{https://en.wikibooks.org/wiki/LaTeX/Importing\_Graphics\#Including\_graphics}. @@ -1298,27 +1312,27 @@ found at \break Including more than two EPS/PDF files in a single figure call can be tricky to easily format. To make the process easier for authors \aastex v6 offers -{\tt\string\gridline} which allows any number of individual EPS/PDF file -calls within a single figure. Each file cited in a {\tt\string\gridline} -will be displayed in a row. By adding more {\tt\string\gridline} calls an +`\gridline` which allows any number of individual EPS/PDF file +calls within a single figure. Each file cited in a `\gridline` +will be displayed in a row. By adding more `\gridline` calls an author can easily construct a matrix X by Y individual files as a single general figure. -For each {\tt\string\gridline} command a EPS/PDF file is called by one of -four different commands. These are {\tt\string\fig}, -{\tt\string\rightfig}, {\tt\string\leftfig}, and {\tt\string\boxedfig}. +For each `\gridline` command a EPS/PDF file is called by one of +four different commands. These are `\fig`, +`\rightfig`, `\leftfig`, and `\boxedfig`. The first file call specifies no image position justification while the next two will right and left justify the image, respectively. The -{\tt\string\boxedfig} is similar to {\tt\string\fig} except that a box is +`\boxedfig` is similar to `\fig` except that a box is drawn around the figure file when displayed. Each of these commands takes three arguments. The first is the file name. The second is the width that file should be displayed at. While any natural \latex unit is allowed, it is recommended that author use fractional units with the -{\tt\string\textwidth}. The last argument is text for a subcaption. +`\textwidth`. The last argument is text for a subcaption. Figure \ref{fig:pyramid} shows an inverted pyramid of individual figure constructed with six individual EPS files using the -{\tt\string\gridline} option. +`\gridline` option. \begin{figure*} \gridline{\fig{V2491_Cyg.pdf}{0.3\textwidth}{(a)} @@ -1467,16 +1481,16 @@ at 01:00 UT on 2012 January 19. The video duration is 20 seconds. \end{figure} Animations and interactive figures (Section \ref{sec:interactive}) should -use the {\tt\string\begin{interactive}} environment in the figure call. This +use the `\begin{interactive}` environment in the figure call. This environment places a blue border around the figure to indicate that the figure is enhanced in the published HTML article. The command also serves to alert the publisher what files are used to generate -the dynamic HTML content. {\tt\string\interactive} takes two arguments. The +the dynamic HTML content. `\interactive` takes two arguments. The first details the type and currently only three are allowed. The types are -{\tt\string js} for generic javascript interactive figures, -{\tt\string animation} for inline videos, and -{\tt\string timeseries} for interactive light curves produced +` js` for generic javascript interactive figures, +` animation` for inline videos, and +` timeseries` for interactive light curves produced by astropy \citet{2013A&A...558A..33A}\footnote{To be release in the summer of 2019}. If these types are not provide the compiler will issue an error and quit. The second argument is the file that produces the enhanced @@ -1499,7 +1513,7 @@ The first 3D model published by the AAS Journals using this technique was Figure \ref{fig:interactive} provides an interactive example which can be run locally to demonstrate how a simple javascript plus html interface allows a reader to switch between figures. The necessary files for this -particular interactive figure are in the {\tt\string interactive.tar.gz} +particular interactive figure are in the ` interactive.tar.gz` file included with this package. Unpack the file and point the browser to the local html file. In this case, the javascript that runs the interactive buttons is embedded in the html file but it could just as easily be calls @@ -1557,12 +1571,12 @@ and helicities $(\sigma = \pm 1)$, $\hat a_i=a^\mu_i\gamma_\nu$ and $P_\tau=\frac{1}{2}(1+\tau\gamma_5)$ is a chirality projection operator $(\tau = \pm1)$. This produces a single line formula. \latex will auto-number this and any subsequent equations. If no number is desired then -the {\tt\string equation} call should be replaced with {\tt\string displaymath}. +the ` equation` call should be replaced with ` displaymath`. -\latex can also handle a a multi-line equation. Use {\tt\string eqnarray} +\latex can also handle a a multi-line equation. Use ` eqnarray` for more than one line and end each line with a \textbackslash\textbackslash. Each line will be numbered unless the -\textbackslash\textbackslash is preceded by a {\tt\string\nonumber} +\textbackslash\textbackslash is preceded by a `\nonumber` command. Alignment points can be added with ampersands (\&). There should be two ampersands per line. In the examples they are centered on the equal symbol. @@ -1590,10 +1604,12 @@ symbol. (\hat a)_\pm & = & a_\mu\sigma^\mu_\pm \end{eqnarray} + # Revision tracking and color highlighting @@ -1603,34 +1619,33 @@ have been introduced to make this easier and formalize the process. The first method is through a new set of editing mark up commands that specifically identify what has been changed. These commands are -{\tt\string\added\{\}}, {\tt\string\deleted\{\}}, and -{\tt\string\replaced\{\}\{\}}. To activate these -commands the {\tt\string trackchanges} option must be used in the -{\tt\string\documentclass} call. When compiled this will produce the -marked text in red. The {\tt\string\explain\{\}} can be used to add +`\added{}`, `\deleted{}`, and +`\replaced{\`{\}}. To activate these +commands the ` trackchanges` option must be used in the +`\documentclass` call. When compiled this will produce the +marked text in red. The `\explain{}` can be used to add text to provide information to the reader describing the change. Its -output is purple italic font. To see how {\tt\string\added\{\}}, {\tt\string\deleted\{\}}, -{\tt\string\replaced\{\}\{\}}, and \break -{\tt\string\explain\{\}} commands will produce +output is purple italic font. To see how `\added{}`, `\deleted{}`, +`\replaced{}{}` and +`\explain{}` commands will produce \added{important added information}\deleted{, deleted text, and } \replaced{old data}{and replaced data,} toggle between versions compiled with -and without the {\tt\string trackchanges} option.\explain{text explaining +and without the ` \trackchanges` option.\explain{text explaining the change} A summary list of all these tracking commands can be produced at the end of -the article by adding the {\tt\string\listofchanges} just before the -{\tt\string\end\{document\}} call. The page number for each change will be -provided. If the {\tt\string linenumbers} option is also included in the +the article by adding the `\listofchanges` just before the +`\end{document}` call. The page number for each change will be +provided. If the ` linenumbers` option is also included in the documentclass call then not only will all the lines in the article be numbered for handy reference but the summary list will also include the line number for each change. The second method does not have the ability to highlight the specific nature of the changes but does allow the author to document changes over -multiple revisions. The commands are {\tt\string\edit1\{\}}, -{\tt\string\edit2\{\}} and {\tt\string\edit3\{\}} and they -produce {\tt\string} that is highlighted in bold, bold+italic and +multiple revisions. The commands are `\edit1{}`, +`\edit2{}` and `\edit3{}` and they +produce `` that is highlighted in bold, bold+italic and bold+underline, respectively. Authors should use the first command to \edit1{indicated which text has been changed from the first revision.} The second command is to highlight \edit2{new or modified text from a second @@ -1639,18 +1654,18 @@ revision}. If a third revision is needed then the last command should be used accepted after the 3rd revision these commands make it easy to identify what text has been added and when. Once the article is accepted all the highlight color can be turned off simply by adding the -{\tt\string\turnoffediting} command in the preamble. Likewise, the new commands -{\tt\string\turnoffeditone}, {\tt\string\turnoffedittwo}, and -{\tt\string\turnoffeditthree} can be used to only turn off the -{\tt\string\edit1\{\}}, {\tt\string\edit2\{\}} and -{\tt\string\edit3\{\}}, respectively. - -Similar to marking editing changes with the {\tt\string\edit} options there -are also the {\tt\string\authorcomments1\{\}}, -{\tt\string\authorcomments2\{\}} and -{\tt\string\authorcomments3\{\}} commands. These produce the same +`\turnoffediting` command in the preamble. Likewise, the new commands +`\turnoffeditone`, `\turnoffedittwo`, and +`\turnoffeditthree` can be used to only turn off the +`\edit1{}`, `\edit2{}` and +`\edit3{}`, respectively. + +Similar to marking editing changes with the `\edit` options there +are also the `\authorcomments1{}`, +`\authorcomments2{}` and +`\authorcomments3{}` commands. These produce the same bold red, italic blue and underlined purple text but when the -{\tt\string\turnoffediting} command is present the {\tt\string} +`\turnoffediting` command is present the `` material does not appear in the manuscript. Authors can use these commands to mark up text that they are not sure should appear in the final manuscript or as a way to communicate comments between co-authors when @@ -1670,34 +1685,27 @@ identifier like a Digital Object Identifier (DOI). A list of repositories that satisfy this criteria plus each one's pros and cons are given at \break \url{https://github.com/AASJournals/Tutorials/tree/master/Repositories}. -In the bibliography the format for data or code follows this format: \\ +In the bibliography the format for data or code follows this format: -\noindent author year, title, version, publisher, prefix:identifier\\ +\noindent author year, title, version, publisher, prefix:identifier \citet{2015ApJ...805...23C} provides a example of how the citation in the article references the external code at \doi{10.5281/zenodo.15991}. Unfortunately, bibtex does not have specific bibtex entries for these types of references so the -``@misc'' type should be used. The Repository tutorial explains how to -code the ``@misc'' type correctly. The most recent aasjournal.bst file, -available with \aastex v6, will output bibtex ``@misc'' type properly. +``@misc`` type should be used. The Repository tutorial explains how to +code the ``@misc`` type correctly. The most recent aasjournal.bst file, +available with \aastex v6, will output bibtex ``@misc`` type properly. + + -\vspace{5mm} -\facilities{HST(STIS), Swift(XRT and UVOT), AAVSO, CTIO:1.3m, -CTIO:1.5m,CXO} - + +\software{astropy \citep{2013A&A...558A..33A,2018AJ....156..123A}, Cloudy \citep{2013RMxAA..49..137F}, Source Extractor \citep{1996A&AS..117..393B}} -\software{astropy \citep{2013A&A...558A..33A,2018AJ....156..123A}, - Cloudy \citep{2013RMxAA..49..137F}, - Source Extractor \citep{1996A&AS..117..393B} - } - +